CDS
| Accession Number | TCMCG073C10109 |
| gbkey | CDS |
| Protein Id | XP_010533877.1 |
| Location | complement(join(2254354..2254483,2254603..2254719,2254925..2255037,2255122..2255196,2255419..2255532,2255716..2256239,2256332..2256388,2256755..2257012,2257106..2257570,2258169..2258334,2258471..2258614,2258699..2258773,2259154..2259224,2259375..2259477,2259579..2259805,2259980..2260097,2260399..2260529,2261111..2261135)) |
| Gene | LOC104809555 |
| GeneID | 104809555 |
| Organism | Tarenaya hassleriana |
Protein
| Length | 970aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA268022 |
| db_source | XM_010535575.2 |
| Definition | PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog isoform X3 [Tarenaya hassleriana] |
EGGNOG-MAPPER Annotation
| COG_category | Z |
| Description | May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko04812 [VIEW IN KEGG] |
| KEGG_ko |
ko:K18643
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0000151
[VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0031461 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0080008 [VIEW IN EMBL-EBI] GO:1902494 [VIEW IN EMBL-EBI] GO:1990234 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCGAAGCGTGGATATAAGCTGCAGGAGTTTTTGGCACATCCTGCAAATGTGAATTGTCTGCGTATTGGAAAGAAGACATCACGGCTTCTTATTACCGGTGGAGATGATTGCAATGTCAACCTTTGGGCAATTGGCAAGCCTACGTCTTTAATGAGTCTTTGTGGGCATACAAGCCCAGTTGACTCGGTAGCTTTTGACTCAGCAGAAGCTTTGGTGCTTGCTGGATCTTCTTCGGGTATGATAAAGCTGTGGGATCTGGAAGAAGCAAAGATCGTTCAAGGTCTTACGGGACACAGATCAAATTGCTCTGCTGTGGAATTCCATCCATTTGGTGAATTTTTTGCATCTGGATCCATGGACTCGAATCTAAAGATTTGGGATATCAGAAAGAAGGGCTGCATTCACACGTACAAGGGTCATACTCGTGGCATTAGCACTATCAAATTTAGTCCTGATGGCCGTTGGGTAGTGTCTGGAGGACTTGACAATGTTGTAAAAGTATGGGATTTGATTGCTGGAAAGCTCTTGCATGATTTTAAATTTCATGAAGGACATATTCGTTCCATTGACTTCCATCCACTTGAGTTTCTCCTTGCCACAGGTTCTGCTGACAGGACTGTCAAGTTCTGGGATTTGGAAACATTTGAACTGATTGGATCTTCCAGACCAGAGGCCACTGGAGTTCGTTCAATCGCTTTTCATCCGGATGGTCAGACCCTTTTTTGTGGATTGGATGATGGTTTGAAGGTTTATTCATGGGAACCTGTGGTTTGCCATGATGGTGTTGATATGGGATGGTCAACACTTGGTGACTTCTGTATCAATGAAGGGAAGCTCCTGGGTTGCTCATACTACCGAAATTCTGTTGGAATATGGGCTGCAGATATATCGCAGATTATCGAGCCATATGGAGCTGGAACGGTGGATAAAAACGAGTATGTGGAAAAAACATTTAGTATGATAGATGATCAATCTTCTGGAGGAACAGGGAGTGTACCAAGGAGAAGTACATCCCCAGATTATGAAACTAAGGAGATAAAAAACATATATATTGACTGTGGAAATTCTACTGCTGCAGAAAAGCCAGGATCCCTAAGTGCTCCAAAAGTGGTATTGCCTATGGAATCTGGAAAAGATAGCAGTATGATGGGCCGGAAGCAGTCTGTTGGACGAACAGAGGACAGGTCTTTTTTCGTGCCTAGTGTTGTACAGCGGGACAGTGATATGGGAAGAGATTCTTCTGATTCTGGAAGGGACTCTATCGCTTTCTCAAGAACTAGACCAGGGATGTTACTAAGACCAGCTCATGTAAGAAAAACCGCAACAAAGTTTGATGAAACAAAGCAGTCAGCTGCTGTTCTGTCTGGGGATCAGAAGAAAAGCGGATCCGATACTGAAAAGGAGGCAGGTACTCAAAACCTGCGTATGAAATTAACTGAAGTGGAGGATTCTACAATCAAGGGCATTGCGGACAAGTTTGAAAAAGCATTATCGCCAGAACCACCGGCTAATGAAGTGAATCGTATTCTGCTGAAACCGCCTCGTGTACAGAGGTCACCAAATCCTAAGTCTAGTGAGGCTAGACGGACATTATCTGTTGATTCTGGAACTTTTGACCATAAAAAGGGTGGGTTAGAGAACTCAACAGACATAGACTTACAAGCAGGCTATGCTAGCGAGGGAAGTGGTAGAAACCTGTCCGAGGAGGATATCAACAAGAGTGTTGCCAGCAACCCTGAAAGAGTTCTATCACCTGAAAAACCTGATTATGACCTGAAAAGCCTCGAATCCCCTGGAGGCAACAATGAGTCGAACTCTGTTAAGATTGTAAGAGGAGTAAAAGTTGTTTCGGGAAGGACACGTTCATTGGTCGAGAGATTTGAGAGAAGAGAAAAATCTACTCATACTGAAGAGAAGACAATTAGTACAACATCAAATCACAACATTAATATGCAGGAAGAGATCAGTACAACAAAGAGACATGCAGTGAGTACAACTCCAAACCCGGTAATGCCTCTAGTACTTGATCGGACAACTAACACGATGTCTGAAGAGCCTACTACGATTTTAATACGGCGAGCTAGGAGTACTCCAGCACGAGTAATGCCTGTGGTACTCAATCAGGCGTCTGATATAACAACATCTGATGAGTCTCTTGTAACTTCGACACTATCAGCTAGGACTTCTCCAGCCCGTGTATTGCCTACAAGATCCGATCAGGCTAATAACCAGACATCTGATATGTCTCATATAGCATCCAGGCAGCGAGCTAGCCCTACGGTACTCGATCCAGTGGTTAATAAGACAGCAGATGAGTTGCATGTAACACCAAATCGACCAGCTAATGATATTTCAGCCGAGAAAGAAGAACCTCAAATATCTGGGAGGGAGAATGATAGTGACATCCTTGAAGATTTGAATCAAACTCATGATGCATTCTTAACCACTCTTCAGTCGAGGTTGACAAAATTACAGATTGTAAGACACTTTTGGGAACGGAAAGATATTAAAGGTGCAATTGGTGCATTGAAGAAGCTGTCCGATCATTCTGTCCAGGCAGATGTTATCGGTATCCTAACGGATAAAACAGAGGTTCTGAAACTTGATCTGTTTTCTGAATTGCTCCCTATCCTCTCTGGCTTATTGGGTAGCCGGGCTGAGAGGCCTGTAAATGTATCCTTGGAAATGCTCTTGAAGCTTGTAGCAGCGTTTGGTTCTGTTATACGCTCAACCGTCTCAGCTCCACGAATTGTAGGTGTTGATCTTCATGCGGAGGAAAGGTTAGAGATTTGCAGAAGTTGTTTCGCGGAATTGCAAAAGGTTCAGAAGATTCTTCCTGTACTCGCAAAACGAGGCGGTATAATATCAAGAAAGTCTCAAGAGCTAAATCTAGTTCTTCAAGAACCATAG |
| Protein: MAKRGYKLQEFLAHPANVNCLRIGKKTSRLLITGGDDCNVNLWAIGKPTSLMSLCGHTSPVDSVAFDSAEALVLAGSSSGMIKLWDLEEAKIVQGLTGHRSNCSAVEFHPFGEFFASGSMDSNLKIWDIRKKGCIHTYKGHTRGISTIKFSPDGRWVVSGGLDNVVKVWDLIAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSSRPEATGVRSIAFHPDGQTLFCGLDDGLKVYSWEPVVCHDGVDMGWSTLGDFCINEGKLLGCSYYRNSVGIWAADISQIIEPYGAGTVDKNEYVEKTFSMIDDQSSGGTGSVPRRSTSPDYETKEIKNIYIDCGNSTAAEKPGSLSAPKVVLPMESGKDSSMMGRKQSVGRTEDRSFFVPSVVQRDSDMGRDSSDSGRDSIAFSRTRPGMLLRPAHVRKTATKFDETKQSAAVLSGDQKKSGSDTEKEAGTQNLRMKLTEVEDSTIKGIADKFEKALSPEPPANEVNRILLKPPRVQRSPNPKSSEARRTLSVDSGTFDHKKGGLENSTDIDLQAGYASEGSGRNLSEEDINKSVASNPERVLSPEKPDYDLKSLESPGGNNESNSVKIVRGVKVVSGRTRSLVERFERREKSTHTEEKTISTTSNHNINMQEEISTTKRHAVSTTPNPVMPLVLDRTTNTMSEEPTTILIRRARSTPARVMPVVLNQASDITTSDESLVTSTLSARTSPARVLPTRSDQANNQTSDMSHIASRQRASPTVLDPVVNKTADELHVTPNRPANDISAEKEEPQISGRENDSDILEDLNQTHDAFLTTLQSRLTKLQIVRHFWERKDIKGAIGALKKLSDHSVQADVIGILTDKTEVLKLDLFSELLPILSGLLGSRAERPVNVSLEMLLKLVAAFGSVIRSTVSAPRIVGVDLHAEERLEICRSCFAELQKVQKILPVLAKRGGIISRKSQELNLVLQEP |